Yusuke Watanabe

Local CrossRef database with 167M+ works and full-text search. Use when resolving DOIs, searching publications, enriching bibliographies, checking citations, or calculating impact factors.

Reproducible matplotlib figures with mm-precision layouts, declarative specs, YAML recipes, multi-panel composition, and diagram generation. Use when creating publication-ready figures.

SciTeX ecosystem general standards — branding, package architecture, four interfaces, version management, and repository quality. Use when creating, auditing, or maintaining any SciTeX package.

App developer SDK — scaffold, validate, dev-install, standalone shell, file operations, and cloud SDK for building SciTeX workspace apps. Use when creating, testing, or deploying SciTeX apps.

Text-to-speech with multiple backends (ElevenLabs, LuxTTS, gTTS, pyttsx3), smart local/relay routing, and MCP tools. Use when generating speech, playing audio notifications, or routing audio between machines.

Hash-based reproducibility verification for scientific pipelines. Use when verifying session runs, tracing provenance chains, auditing full DAGs, registering manuscript claims, or creating temporal stamps.

Unified container management for Apptainer/Singularity and Docker — build SIFs, manage sandboxes, version/rollback, SLURM integration, freeze lock files, verify integrity, environment snapshots. Use when working with containers for HPC or reproducible environments.

Dataset fetcher for neuroscience research — OpenNeuro, DANDI, PhysioNet with local database search and BIDS support.

Shared developer utilities for the SciTeX ecosystem — ecosystem management, version checking, bulk rename, docs aggregation, Result types, and HPC test runner.

Universal file I/O supporting 30+ formats (CSV, NumPy, pickle, YAML, JSON, HDF5, images, figures, etc.). Use when loading or saving data files in scientific workflows.

SciTeX code convention checker with pluggable rules for imports, naming, path handling, and package-specific patterns.

Scientific-paper search, metadata enrichment, PDF download, and BibTeX library management for the SciTeX ecosystem. Use when searching the literature, resolving DOIs, enriching citations, downloading PDFs through institutional access, or managing a reproducible paper library.

Publication-ready statistical testing — 23 tests, effect sizes, power analysis, auto test selection, and MCP tools for AI agents.

Persistent SSH reverse tunnel for NAT traversal - auto-reconnecting tunnels for accessing machines behind firewalls. Use when setting up remote access to lab machines or HPC nodes.

Vanilla TS workspace shell framework + React app components for SciTeX apps. Use when building or customizing SciTeX workspace UIs, integrating shell panels, or using frontend components.

LaTeX manuscript compilation with bibliography, figures, tables, claims tracking, and journal guideline enforcement.